Gene : evm_27.TU.AmTr_v1.0_scaffold00004.140 A. trichopoda v1.0
Defline:  (1 of 2) 6.1.1.9 - Valine--tRNA ligase / Valyl-tRNA synthetase Genomic Order:  140
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00004.140 Secondary Identifier:  ? PAC:31550569
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda TRNA-CHARGING-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00004.140 0.5kb upstream 0.5kb upstream 25940 true AmTr_v1.0_scaffold00004: 2074277-2100216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00004: 2099717-2100216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 0.5kb downstream 0.5kb downstream 25940 true AmTr_v1.0_scaffold00004: 2073777-2099716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00004: 2073777-2074276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 1.0kb upstream 1.0kb upstream 26440 true AmTr_v1.0_scaffold00004: 2074277-2100716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00004: 2099717-2100716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 1.0kb downstream 1.0kb downstream 26440 true AmTr_v1.0_scaffold00004: 2073277-2099716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00004: 2073277-2074276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 2.0kb upstream 2.0kb upstream 27440 true AmTr_v1.0_scaffold00004: 2074277-2101716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00004: 2099717-2101716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 2.0kb downstream 2.0kb downstream 27440 true AmTr_v1.0_scaffold00004: 2072277-2099716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00004: 2072277-2074276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 5.0kb upstream 5.0kb upstream 30440 true AmTr_v1.0_scaffold00004: 2074277-2104716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00004: 2099717-2104716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 5.0kb downstream 5.0kb downstream 30440 true AmTr_v1.0_scaffold00004: 2069277-2099716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00004: 2069277-2074276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 10.0kb upstream 10.0kb upstream 35440 true AmTr_v1.0_scaffold00004: 2074277-2109716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00004: 2099717-2109716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 10.0kb downstream 10.0kb downstream 35440 true AmTr_v1.0_scaffold00004: 2064277-2099716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.140 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00004: 2064277-2074276 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain