Gene : evm_27.TU.AmTr_v1.0_scaffold00006.308 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23315:SF116 - U-BOX DOMAIN-CONTAINING PROTEIN 18-RELATED Genomic Order:  304
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00006.308 Secondary Identifier:  ? PAC:31560287
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7511 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00006.308 0.5kb upstream 0.5kb upstream 2594 true AmTr_v1.0_scaffold00006: 9039853-9042446 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00006: 9041947-9042446 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 0.5kb downstream 0.5kb downstream 2594 true AmTr_v1.0_scaffold00006: 9039353-9041946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00006: 9039353-9039852 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 1.0kb upstream 1.0kb upstream 3094 true AmTr_v1.0_scaffold00006: 9039853-9042946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00006: 9041947-9042946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 1.0kb downstream 1.0kb downstream 3094 true AmTr_v1.0_scaffold00006: 9038853-9041946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00006: 9038853-9039852 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 2.0kb upstream 2.0kb upstream 4094 true AmTr_v1.0_scaffold00006: 9039853-9043946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00006: 9041947-9043946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 2.0kb downstream 2.0kb downstream 4094 true AmTr_v1.0_scaffold00006: 9037853-9041946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00006: 9037853-9039852 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 5.0kb upstream 5.0kb upstream 7094 true AmTr_v1.0_scaffold00006: 9039853-9046946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00006: 9041947-9046946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 5.0kb downstream 5.0kb downstream 7094 true AmTr_v1.0_scaffold00006: 9034853-9041946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00006: 9034853-9039852 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 10.0kb upstream 10.0kb upstream 12094 true AmTr_v1.0_scaffold00006: 9039853-9051946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00006: 9041947-9051946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 10.0kb downstream 10.0kb downstream 12094 true AmTr_v1.0_scaffold00006: 9029853-9041946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.308 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00006: 9029853-9039852 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046188 5273 Angiosperm View MSA
121310571 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain