Gene : evm_27.TU.AmTr_v1.0_scaffold00006.279 A. trichopoda v1.0
Defline:  (1 of 4) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  276
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00006.279 Secondary Identifier:  ? PAC:31560242
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00006.279 0.5kb upstream 0.5kb upstream 2985 true AmTr_v1.0_scaffold00006: 8552248-8555232 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00006: 8554733-8555232 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 0.5kb downstream 0.5kb downstream 2985 true AmTr_v1.0_scaffold00006: 8551748-8554732 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00006: 8551748-8552247 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 1.0kb upstream 1.0kb upstream 3485 true AmTr_v1.0_scaffold00006: 8552248-8555732 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00006: 8554733-8555732 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 1.0kb downstream 1.0kb downstream 3485 true AmTr_v1.0_scaffold00006: 8551248-8554732 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00006: 8551248-8552247 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 2.0kb upstream 2.0kb upstream 4485 true AmTr_v1.0_scaffold00006: 8552248-8556732 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00006: 8554733-8556732 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 2.0kb downstream 2.0kb downstream 4485 true AmTr_v1.0_scaffold00006: 8550248-8554732 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00006: 8550248-8552247 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 5.0kb upstream 5.0kb upstream 7485 true AmTr_v1.0_scaffold00006: 8552248-8559732 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00006: 8554733-8559732 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 5.0kb downstream 5.0kb downstream 7485 true AmTr_v1.0_scaffold00006: 8547248-8554732 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00006: 8547248-8552247 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 10.0kb upstream 10.0kb upstream 12485 true AmTr_v1.0_scaffold00006: 8552248-8564732 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00006: 8554733-8564732 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 10.0kb downstream 10.0kb downstream 12485 true AmTr_v1.0_scaffold00006: 8542248-8554732 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.279 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00006: 8542248-8552247 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050900 5273 Angiosperm View MSA
121343809 5274 Embryophyte View MSA
123427732 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain