Gene : evm_27.TU.AmTr_v1.0_scaffold00006.134 A. trichopoda v1.0
Defline:  (1 of 1) 6.1.1.18 - Glutamine--tRNA ligase / Glutaminyl-tRNA synthetase Genomic Order:  132
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00006.134 Secondary Identifier:  ? PAC:31560500
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda TRNA-CHARGING-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00006.134 0.5kb upstream 0.5kb upstream 33943 true AmTr_v1.0_scaffold00006: 6051510-6085452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00006: 6051510-6052009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 0.5kb downstream 0.5kb downstream 33943 true AmTr_v1.0_scaffold00006: 6052010-6085952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00006: 6085453-6085952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 1.0kb upstream 1.0kb upstream 34443 true AmTr_v1.0_scaffold00006: 6051010-6085452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00006: 6051010-6052009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 1.0kb downstream 1.0kb downstream 34443 true AmTr_v1.0_scaffold00006: 6052010-6086452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00006: 6085453-6086452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 2.0kb upstream 2.0kb upstream 35443 true AmTr_v1.0_scaffold00006: 6050010-6085452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00006: 6050010-6052009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 2.0kb downstream 2.0kb downstream 35443 true AmTr_v1.0_scaffold00006: 6052010-6087452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00006: 6085453-6087452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 5.0kb upstream 5.0kb upstream 38443 true AmTr_v1.0_scaffold00006: 6047010-6085452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00006: 6047010-6052009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 5.0kb downstream 5.0kb downstream 38443 true AmTr_v1.0_scaffold00006: 6052010-6090452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00006: 6085453-6090452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 10.0kb upstream 10.0kb upstream 43443 true AmTr_v1.0_scaffold00006: 6042010-6085452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00006: 6042010-6052009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 10.0kb downstream 10.0kb downstream 43443 true AmTr_v1.0_scaffold00006: 6052010-6095452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.134 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00006: 6085453-6095452 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046880 5273 Angiosperm View MSA
121346731 5274 Embryophyte View MSA
123424701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain