Gene : evm_27.TU.AmTr_v1.0_scaffold00006.119 A. trichopoda v1.0
Defline:  (1 of 1) PTHR19924:SF26 - U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 HOMOLOG Genomic Order:  117
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00006.119 Secondary Identifier:  ? PAC:31560425
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00006.119 0.5kb upstream 0.5kb upstream 2385 true AmTr_v1.0_scaffold00006: 5721602-5723986 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00006: 5721602-5722101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 0.5kb downstream 0.5kb downstream 2385 true AmTr_v1.0_scaffold00006: 5722102-5724486 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00006: 5723987-5724486 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 1.0kb upstream 1.0kb upstream 2885 true AmTr_v1.0_scaffold00006: 5721102-5723986 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00006: 5721102-5722101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 1.0kb downstream 1.0kb downstream 2885 true AmTr_v1.0_scaffold00006: 5722102-5724986 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00006: 5723987-5724986 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 2.0kb upstream 2.0kb upstream 3885 true AmTr_v1.0_scaffold00006: 5720102-5723986 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00006: 5720102-5722101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 2.0kb downstream 2.0kb downstream 3885 true AmTr_v1.0_scaffold00006: 5722102-5725986 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00006: 5723987-5725986 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 5.0kb upstream 5.0kb upstream 6885 true AmTr_v1.0_scaffold00006: 5717102-5723986 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00006: 5717102-5722101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 5.0kb downstream 5.0kb downstream 6885 true AmTr_v1.0_scaffold00006: 5722102-5728986 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00006: 5723987-5728986 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 10.0kb upstream 10.0kb upstream 11885 true AmTr_v1.0_scaffold00006: 5712102-5723986 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00006: 5712102-5722101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 10.0kb downstream 10.0kb downstream 11885 true AmTr_v1.0_scaffold00006: 5722102-5733986 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.119 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00006: 5723987-5733986 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041129 5273 Angiosperm View MSA
121344745 5274 Embryophyte View MSA
123424806 5275 Viridiplantae View MSA

0 Rna Seq Expressions

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