Gene : evm_27.TU.AmTr_v1.0_scaffold00004.82 A. trichopoda v1.0
Defline:  (1 of 1) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase Genomic Order:  82
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00004.82 Secondary Identifier:  ? PAC:31550468
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda BRANCHED-CHAIN-AA-SYN-PWY Amborella trichopoda pathologic  
Atrichopoda ILEUSYN-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-3001 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00004.82 0.5kb upstream 0.5kb upstream 15790 true AmTr_v1.0_scaffold00004: 1232137-1247926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00004: 1232137-1232636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 0.5kb downstream 0.5kb downstream 15790 true AmTr_v1.0_scaffold00004: 1232637-1248426 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00004: 1247927-1248426 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 1.0kb upstream 1.0kb upstream 16290 true AmTr_v1.0_scaffold00004: 1231637-1247926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00004: 1231637-1232636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 1.0kb downstream 1.0kb downstream 16290 true AmTr_v1.0_scaffold00004: 1232637-1248926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00004: 1247927-1248926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 2.0kb upstream 2.0kb upstream 17290 true AmTr_v1.0_scaffold00004: 1230637-1247926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00004: 1230637-1232636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 2.0kb downstream 2.0kb downstream 17290 true AmTr_v1.0_scaffold00004: 1232637-1249926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00004: 1247927-1249926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 5.0kb upstream 5.0kb upstream 20290 true AmTr_v1.0_scaffold00004: 1227637-1247926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00004: 1227637-1232636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 5.0kb downstream 5.0kb downstream 20290 true AmTr_v1.0_scaffold00004: 1232637-1252926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00004: 1247927-1252926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 10.0kb upstream 10.0kb upstream 25290 true AmTr_v1.0_scaffold00004: 1222637-1247926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00004: 1222637-1232636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 10.0kb downstream 10.0kb downstream 25290 true AmTr_v1.0_scaffold00004: 1232637-1257926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.82 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00004: 1247927-1257926 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040897 5273 Angiosperm View MSA
121344792 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain