Gene : evm_27.TU.AmTr_v1.0_scaffold00005.129 A. trichopoda v1.0
Defline:  (1 of 2) PF01805//PF04818 - Surp module (Surp) // RNA polymerase II-binding domain. (CTD_bind) Genomic Order:  126
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00005.129 Secondary Identifier:  ? PAC:31575955
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00005.129 0.5kb upstream 0.5kb upstream 22520 true AmTr_v1.0_scaffold00005: 5627399-5649918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00005: 5627399-5627898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 0.5kb downstream 0.5kb downstream 22520 true AmTr_v1.0_scaffold00005: 5627899-5650418 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00005: 5649919-5650418 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 1.0kb upstream 1.0kb upstream 23020 true AmTr_v1.0_scaffold00005: 5626899-5649918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00005: 5626899-5627898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 1.0kb downstream 1.0kb downstream 23020 true AmTr_v1.0_scaffold00005: 5627899-5650918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00005: 5649919-5650918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 2.0kb upstream 2.0kb upstream 24020 true AmTr_v1.0_scaffold00005: 5625899-5649918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00005: 5625899-5627898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 2.0kb downstream 2.0kb downstream 24020 true AmTr_v1.0_scaffold00005: 5627899-5651918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00005: 5649919-5651918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 5.0kb upstream 5.0kb upstream 27020 true AmTr_v1.0_scaffold00005: 5622899-5649918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00005: 5622899-5627898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 5.0kb downstream 5.0kb downstream 27020 true AmTr_v1.0_scaffold00005: 5627899-5654918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00005: 5649919-5654918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 10.0kb upstream 10.0kb upstream 32020 true AmTr_v1.0_scaffold00005: 5617899-5649918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00005: 5617899-5627898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 10.0kb downstream 10.0kb downstream 32020 true AmTr_v1.0_scaffold00005: 5627899-5659918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.129 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00005: 5649919-5659918 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044059 5273 Angiosperm View MSA
121346189 5274 Embryophyte View MSA
123424893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain