Gene : evm_27.TU.AmTr_v1.0_scaffold00007.78 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10209//PTHR10209:SF199 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN Genomic Order:  77
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00007.78 Secondary Identifier:  ? PAC:31557649
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00007.78 0.5kb upstream 0.5kb upstream 1887 true AmTr_v1.0_scaffold00007: 1689603-1691489 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00007: 1689603-1690102 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 0.5kb downstream 0.5kb downstream 1887 true AmTr_v1.0_scaffold00007: 1690103-1691989 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00007: 1691490-1691989 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 1.0kb upstream 1.0kb upstream 2387 true AmTr_v1.0_scaffold00007: 1689103-1691489 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00007: 1689103-1690102 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 1.0kb downstream 1.0kb downstream 2387 true AmTr_v1.0_scaffold00007: 1690103-1692489 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00007: 1691490-1692489 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 2.0kb upstream 2.0kb upstream 3387 true AmTr_v1.0_scaffold00007: 1688103-1691489 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00007: 1688103-1690102 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 2.0kb downstream 2.0kb downstream 3387 true AmTr_v1.0_scaffold00007: 1690103-1693489 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00007: 1691490-1693489 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 5.0kb upstream 5.0kb upstream 6387 true AmTr_v1.0_scaffold00007: 1685103-1691489 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00007: 1685103-1690102 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 5.0kb downstream 5.0kb downstream 6387 true AmTr_v1.0_scaffold00007: 1690103-1696489 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00007: 1691490-1696489 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 10.0kb upstream 10.0kb upstream 11387 true AmTr_v1.0_scaffold00007: 1680103-1691489 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00007: 1680103-1690102 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 10.0kb downstream 10.0kb downstream 11387 true AmTr_v1.0_scaffold00007: 1690103-1701489 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.78 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00007: 1691490-1701489 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046716 5273 Angiosperm View MSA
121310645 5274 Embryophyte View MSA
123348077 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain