Gene : evm_27.TU.AmTr_v1.0_scaffold00009.143 A. trichopoda v1.0
Defline:  (1 of 7) PF01388 - ARID/BRIGHT DNA binding domain (ARID) Genomic Order:  142
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00009.143 Secondary Identifier:  ? PAC:31568586
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00009.143 0.5kb upstream 0.5kb upstream 2579 true AmTr_v1.0_scaffold00009: 4129282-4131860 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00009: 4129282-4129781 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 0.5kb downstream 0.5kb downstream 2579 true AmTr_v1.0_scaffold00009: 4129782-4132360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00009: 4131861-4132360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 1.0kb upstream 1.0kb upstream 3079 true AmTr_v1.0_scaffold00009: 4128782-4131860 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00009: 4128782-4129781 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 1.0kb downstream 1.0kb downstream 3079 true AmTr_v1.0_scaffold00009: 4129782-4132860 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00009: 4131861-4132860 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 2.0kb upstream 2.0kb upstream 4079 true AmTr_v1.0_scaffold00009: 4127782-4131860 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00009: 4127782-4129781 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 2.0kb downstream 2.0kb downstream 4079 true AmTr_v1.0_scaffold00009: 4129782-4133860 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00009: 4131861-4133860 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 5.0kb upstream 5.0kb upstream 7079 true AmTr_v1.0_scaffold00009: 4124782-4131860 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00009: 4124782-4129781 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 5.0kb downstream 5.0kb downstream 7079 true AmTr_v1.0_scaffold00009: 4129782-4136860 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00009: 4131861-4136860 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 10.0kb upstream 10.0kb upstream 12079 true AmTr_v1.0_scaffold00009: 4119782-4131860 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00009: 4119782-4129781 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 10.0kb downstream 10.0kb downstream 12079 true AmTr_v1.0_scaffold00009: 4129782-4141860 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.143 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00009: 4131861-4141860 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051655 5273 Angiosperm View MSA
121312599 5274 Embryophyte View MSA
123349756 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain