Gene : evm_27.TU.AmTr_v1.0_scaffold00009.107 A. trichopoda v1.0

Defline:  (1 of 1) PTHR11937:SF13 - ACTIN-RELATED PROTEIN 8 Genomic Order:  106
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00009.107 Secondary Identifier:  ? PAC:31568630

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00009.107 0.5kb upstream 0.5kb upstream 44607 true AmTr_v1.0_scaffold00009: 2910314-2954920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00009: 2954421-2954920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 0.5kb downstream 0.5kb downstream 44607 true AmTr_v1.0_scaffold00009: 2909814-2954420 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00009: 2909814-2910313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 1.0kb upstream 1.0kb upstream 45107 true AmTr_v1.0_scaffold00009: 2910314-2955420 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00009: 2954421-2955420 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 1.0kb downstream 1.0kb downstream 45107 true AmTr_v1.0_scaffold00009: 2909314-2954420 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00009: 2909314-2910313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 2.0kb upstream 2.0kb upstream 46107 true AmTr_v1.0_scaffold00009: 2910314-2956420 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00009: 2954421-2956420 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 2.0kb downstream 2.0kb downstream 46107 true AmTr_v1.0_scaffold00009: 2908314-2954420 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00009: 2908314-2910313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 5.0kb upstream 5.0kb upstream 49107 true AmTr_v1.0_scaffold00009: 2910314-2959420 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00009: 2954421-2959420 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 5.0kb downstream 5.0kb downstream 49107 true AmTr_v1.0_scaffold00009: 2905314-2954420 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00009: 2905314-2910313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 10.0kb upstream 10.0kb upstream 54107 true AmTr_v1.0_scaffold00009: 2910314-2964420 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00009: 2954421-2964420 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 10.0kb downstream 10.0kb downstream 54107 true AmTr_v1.0_scaffold00009: 2900314-2954420 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.107 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00009: 2900314-2910313 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046420 5273 Angiosperm View MSA
121345256 5274 Embryophyte View MSA
123380181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain