Gene : evm_27.TU.AmTr_v1.0_scaffold00009.219 A. trichopoda v1.0
Defline:  (1 of 1) 5.5.1.9 - Cycloeucalenol cycloisomerase / Cycloeucalenol--obtusifoliol isomerase Genomic Order:  217
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00009.219 Secondary Identifier:  ? PAC:31568546
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-2541 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00009.219 0.5kb upstream 0.5kb upstream 18513 true AmTr_v1.0_scaffold00009: 5659685-5678197 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00009: 5677698-5678197 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 0.5kb downstream 0.5kb downstream 18513 true AmTr_v1.0_scaffold00009: 5659185-5677697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00009: 5659185-5659684 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 1.0kb upstream 1.0kb upstream 19013 true AmTr_v1.0_scaffold00009: 5659685-5678697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00009: 5677698-5678697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 1.0kb downstream 1.0kb downstream 19013 true AmTr_v1.0_scaffold00009: 5658685-5677697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00009: 5658685-5659684 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 2.0kb upstream 2.0kb upstream 20013 true AmTr_v1.0_scaffold00009: 5659685-5679697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00009: 5677698-5679697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 2.0kb downstream 2.0kb downstream 20013 true AmTr_v1.0_scaffold00009: 5657685-5677697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00009: 5657685-5659684 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 5.0kb upstream 5.0kb upstream 23013 true AmTr_v1.0_scaffold00009: 5659685-5682697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00009: 5677698-5682697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 5.0kb downstream 5.0kb downstream 23013 true AmTr_v1.0_scaffold00009: 5654685-5677697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00009: 5654685-5659684 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 10.0kb upstream 10.0kb upstream 28013 true AmTr_v1.0_scaffold00009: 5659685-5687697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00009: 5677698-5687697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 10.0kb downstream 10.0kb downstream 28013 true AmTr_v1.0_scaffold00009: 5649685-5677697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.219 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00009: 5649685-5659684 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046906 5273 Angiosperm View MSA
121345110 5274 Embryophyte View MSA
123424971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain