Gene : evm_27.TU.AmTr_v1.0_scaffold00010.52 A. trichopoda v1.0
Defline:  (1 of 2) 5.1.3.3 - Aldose 1-epimerase / Mutarotase Genomic Order:  52
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00010.52 Secondary Identifier:  ? PAC:31573063
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY66-422 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00010.52 0.5kb upstream 0.5kb upstream 4249 true AmTr_v1.0_scaffold00010: 1108040-1112288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00010: 1108040-1108539 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 0.5kb downstream 0.5kb downstream 4249 true AmTr_v1.0_scaffold00010: 1108540-1112788 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00010: 1112289-1112788 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 1.0kb upstream 1.0kb upstream 4749 true AmTr_v1.0_scaffold00010: 1107540-1112288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00010: 1107540-1108539 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 1.0kb downstream 1.0kb downstream 4749 true AmTr_v1.0_scaffold00010: 1108540-1113288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00010: 1112289-1113288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 2.0kb upstream 2.0kb upstream 5749 true AmTr_v1.0_scaffold00010: 1106540-1112288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00010: 1106540-1108539 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 2.0kb downstream 2.0kb downstream 5749 true AmTr_v1.0_scaffold00010: 1108540-1114288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00010: 1112289-1114288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 5.0kb upstream 5.0kb upstream 8749 true AmTr_v1.0_scaffold00010: 1103540-1112288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00010: 1103540-1108539 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 5.0kb downstream 5.0kb downstream 8749 true AmTr_v1.0_scaffold00010: 1108540-1117288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00010: 1112289-1117288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 10.0kb upstream 10.0kb upstream 13749 true AmTr_v1.0_scaffold00010: 1098540-1112288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00010: 1098540-1108539 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 10.0kb downstream 10.0kb downstream 13749 true AmTr_v1.0_scaffold00010: 1108540-1122288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.52 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00010: 1112289-1122288 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043649 5273 Angiosperm View MSA
121346493 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain