Gene : evm_27.TU.AmTr_v1.0_scaffold00010.472 A. trichopoda v1.0
Defline:  (1 of 2) PTHR11540:SF14 - MALATE DEHYDROGENASE, CHLOROPLASTIC Genomic Order:  468
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00010.472 Secondary Identifier:  ? PAC:31572901
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda GLUCONEO-PWY Amborella trichopoda pathologic  
Atrichopoda GLYOXYLATE-BYPASS Amborella trichopoda pathologic  
Atrichopoda PWY-5464 Amborella trichopoda pathologic  
Atrichopoda PWY-561 Amborella trichopoda pathologic  
Atrichopoda PWY-5690 Amborella trichopoda pathologic  
Atrichopoda PWY-7115 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00010.472 0.5kb upstream 0.5kb upstream 1742 true AmTr_v1.0_scaffold00010: 8010136-8011877 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00010: 8011378-8011877 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 0.5kb downstream 0.5kb downstream 1742 true AmTr_v1.0_scaffold00010: 8009636-8011377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00010: 8009636-8010135 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 1.0kb upstream 1.0kb upstream 2242 true AmTr_v1.0_scaffold00010: 8010136-8012377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00010: 8011378-8012377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 1.0kb downstream 1.0kb downstream 2242 true AmTr_v1.0_scaffold00010: 8009136-8011377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00010: 8009136-8010135 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 2.0kb upstream 2.0kb upstream 3242 true AmTr_v1.0_scaffold00010: 8010136-8013377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00010: 8011378-8013377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 2.0kb downstream 2.0kb downstream 3242 true AmTr_v1.0_scaffold00010: 8008136-8011377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00010: 8008136-8010135 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 5.0kb upstream 5.0kb upstream 6242 true AmTr_v1.0_scaffold00010: 8010136-8016377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00010: 8011378-8016377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 5.0kb downstream 5.0kb downstream 6242 true AmTr_v1.0_scaffold00010: 8005136-8011377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00010: 8005136-8010135 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 10.0kb upstream 10.0kb upstream 11242 true AmTr_v1.0_scaffold00010: 8010136-8021377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00010: 8011378-8021377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 10.0kb downstream 10.0kb downstream 11242 true AmTr_v1.0_scaffold00010: 8000136-8011377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.472 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00010: 8000136-8010135 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049358 5273 Angiosperm View MSA
121344647 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain