Gene : evm_27.TU.AmTr_v1.0_scaffold00010.430 A. trichopoda v1.0
Defline:  (1 of 2) PTHR10794:SF53 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  427
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00010.430 Secondary Identifier:  ? PAC:31572764
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00010.430 0.5kb upstream 0.5kb upstream 4374 true AmTr_v1.0_scaffold00010: 7528907-7533280 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00010: 7528907-7529406 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 0.5kb downstream 0.5kb downstream 4374 true AmTr_v1.0_scaffold00010: 7529407-7533780 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00010: 7533281-7533780 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 1.0kb upstream 1.0kb upstream 4874 true AmTr_v1.0_scaffold00010: 7528407-7533280 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00010: 7528407-7529406 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 1.0kb downstream 1.0kb downstream 4874 true AmTr_v1.0_scaffold00010: 7529407-7534280 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00010: 7533281-7534280 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 2.0kb upstream 2.0kb upstream 5874 true AmTr_v1.0_scaffold00010: 7527407-7533280 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00010: 7527407-7529406 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 2.0kb downstream 2.0kb downstream 5874 true AmTr_v1.0_scaffold00010: 7529407-7535280 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00010: 7533281-7535280 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 5.0kb upstream 5.0kb upstream 8874 true AmTr_v1.0_scaffold00010: 7524407-7533280 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00010: 7524407-7529406 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 5.0kb downstream 5.0kb downstream 8874 true AmTr_v1.0_scaffold00010: 7529407-7538280 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00010: 7533281-7538280 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 10.0kb upstream 10.0kb upstream 13874 true AmTr_v1.0_scaffold00010: 7519407-7533280 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00010: 7519407-7529406 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 10.0kb downstream 10.0kb downstream 13874 true AmTr_v1.0_scaffold00010: 7529407-7543280 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.430 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00010: 7533281-7543280 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042712 5273 Angiosperm View MSA
121349023 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

0 Rna Seq Expressions

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