Gene : evm_27.TU.AmTr_v1.0_scaffold00010.243 A. trichopoda v1.0
Defline:  (1 of 1) KOG0978//KOG4593 - E3 ubiquitin ligase involved in syntaxin degradation // Mitotic checkpoint protein MAD1 Genomic Order:  242
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00010.243 Secondary Identifier:  ? PAC:31572757
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00010.243 0.5kb upstream 0.5kb upstream 10910 true AmTr_v1.0_scaffold00010: 4582976-4593885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00010: 4582976-4583475 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 0.5kb downstream 0.5kb downstream 10910 true AmTr_v1.0_scaffold00010: 4583476-4594385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00010: 4593886-4594385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 1.0kb upstream 1.0kb upstream 11410 true AmTr_v1.0_scaffold00010: 4582476-4593885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00010: 4582476-4583475 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 1.0kb downstream 1.0kb downstream 11410 true AmTr_v1.0_scaffold00010: 4583476-4594885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00010: 4593886-4594885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 2.0kb upstream 2.0kb upstream 12410 true AmTr_v1.0_scaffold00010: 4581476-4593885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00010: 4581476-4583475 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 2.0kb downstream 2.0kb downstream 12410 true AmTr_v1.0_scaffold00010: 4583476-4595885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00010: 4593886-4595885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 5.0kb upstream 5.0kb upstream 15410 true AmTr_v1.0_scaffold00010: 4578476-4593885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00010: 4578476-4583475 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 5.0kb downstream 5.0kb downstream 15410 true AmTr_v1.0_scaffold00010: 4583476-4598885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00010: 4593886-4598885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 10.0kb upstream 10.0kb upstream 20410 true AmTr_v1.0_scaffold00010: 4573476-4593885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00010: 4573476-4583475 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 10.0kb downstream 10.0kb downstream 20410 true AmTr_v1.0_scaffold00010: 4583476-4603885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.243 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00010: 4593886-4603885 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048313 5273 Angiosperm View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain