Gene : evm_27.TU.AmTr_v1.0_scaffold00010.291 A. trichopoda v1.0
Defline:  (1 of 1) KOG2027 - Spindle pole body protein Genomic Order:  288
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00010.291 Secondary Identifier:  ? PAC:31572981
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00010.291 0.5kb upstream 0.5kb upstream 3664 true AmTr_v1.0_scaffold00010: 5350177-5353840 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00010: 5350177-5350676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 0.5kb downstream 0.5kb downstream 3664 true AmTr_v1.0_scaffold00010: 5350677-5354340 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00010: 5353841-5354340 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 1.0kb upstream 1.0kb upstream 4164 true AmTr_v1.0_scaffold00010: 5349677-5353840 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00010: 5349677-5350676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 1.0kb downstream 1.0kb downstream 4164 true AmTr_v1.0_scaffold00010: 5350677-5354840 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00010: 5353841-5354840 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 2.0kb upstream 2.0kb upstream 5164 true AmTr_v1.0_scaffold00010: 5348677-5353840 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00010: 5348677-5350676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 2.0kb downstream 2.0kb downstream 5164 true AmTr_v1.0_scaffold00010: 5350677-5355840 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00010: 5353841-5355840 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 5.0kb upstream 5.0kb upstream 8164 true AmTr_v1.0_scaffold00010: 5345677-5353840 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00010: 5345677-5350676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 5.0kb downstream 5.0kb downstream 8164 true AmTr_v1.0_scaffold00010: 5350677-5358840 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00010: 5353841-5358840 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 10.0kb upstream 10.0kb upstream 13164 true AmTr_v1.0_scaffold00010: 5340677-5353840 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00010: 5340677-5350676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 10.0kb downstream 10.0kb downstream 13164 true AmTr_v1.0_scaffold00010: 5350677-5363840 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.291 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00010: 5353841-5363840 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045314 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain