Gene : evm_27.TU.AmTr_v1.0_scaffold00010.123 A. trichopoda v1.0
Defline:  (1 of 1) PTHR22573:SF47 - PHOSPHOGLUCOMUTASE, CYTOPLASMIC 1-RELATED Genomic Order:  122
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00010.123 Secondary Identifier:  ? PAC:31572963
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda GLUCOSE1PMETAB-PWY Amborella trichopoda pathologic  
Atrichopoda GLYCOGENSYNTH-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-3801 Amborella trichopoda pathologic  
Atrichopoda PWY-622 Amborella trichopoda pathologic  
Atrichopoda PWY66-422 Amborella trichopoda pathologic  
Atrichopoda PWY-7238 Amborella trichopoda pathologic  
Atrichopoda PWY-7343 Amborella trichopoda pathologic  
Atrichopoda SUCSYN-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00010.123 0.5kb upstream 0.5kb upstream 15966 true AmTr_v1.0_scaffold00010: 2462248-2478213 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00010: 2462248-2462747 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 0.5kb downstream 0.5kb downstream 15966 true AmTr_v1.0_scaffold00010: 2462748-2478713 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00010: 2478214-2478713 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 1.0kb upstream 1.0kb upstream 16466 true AmTr_v1.0_scaffold00010: 2461748-2478213 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00010: 2461748-2462747 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 1.0kb downstream 1.0kb downstream 16466 true AmTr_v1.0_scaffold00010: 2462748-2479213 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00010: 2478214-2479213 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 2.0kb upstream 2.0kb upstream 17466 true AmTr_v1.0_scaffold00010: 2460748-2478213 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00010: 2460748-2462747 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 2.0kb downstream 2.0kb downstream 17466 true AmTr_v1.0_scaffold00010: 2462748-2480213 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00010: 2478214-2480213 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 5.0kb upstream 5.0kb upstream 20466 true AmTr_v1.0_scaffold00010: 2457748-2478213 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00010: 2457748-2462747 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 5.0kb downstream 5.0kb downstream 20466 true AmTr_v1.0_scaffold00010: 2462748-2483213 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00010: 2478214-2483213 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 10.0kb upstream 10.0kb upstream 25466 true AmTr_v1.0_scaffold00010: 2452748-2478213 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00010: 2452748-2462747 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 10.0kb downstream 10.0kb downstream 25466 true AmTr_v1.0_scaffold00010: 2462748-2488213 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.123 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00010: 2478214-2488213 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain