Gene : evm_27.TU.AmTr_v1.0_scaffold00012.298 A. trichopoda v1.0
Defline:  (1 of 4) PTHR12694 - TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1 Genomic Order:  294
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00012.298 Secondary Identifier:  ? PAC:31553265
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00012.298 0.5kb upstream 0.5kb upstream 14023 true AmTr_v1.0_scaffold00012: 7077848-7091870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00012: 7077848-7078347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 0.5kb downstream 0.5kb downstream 14023 true AmTr_v1.0_scaffold00012: 7078348-7092370 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00012: 7091871-7092370 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 1.0kb upstream 1.0kb upstream 14523 true AmTr_v1.0_scaffold00012: 7077348-7091870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00012: 7077348-7078347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 1.0kb downstream 1.0kb downstream 14523 true AmTr_v1.0_scaffold00012: 7078348-7092870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00012: 7091871-7092870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 2.0kb upstream 2.0kb upstream 15523 true AmTr_v1.0_scaffold00012: 7076348-7091870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00012: 7076348-7078347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 2.0kb downstream 2.0kb downstream 15523 true AmTr_v1.0_scaffold00012: 7078348-7093870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00012: 7091871-7093870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 5.0kb upstream 5.0kb upstream 18523 true AmTr_v1.0_scaffold00012: 7073348-7091870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00012: 7073348-7078347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 5.0kb downstream 5.0kb downstream 18523 true AmTr_v1.0_scaffold00012: 7078348-7096870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00012: 7091871-7096870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 10.0kb upstream 10.0kb upstream 23523 true AmTr_v1.0_scaffold00012: 7068348-7091870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00012: 7068348-7078347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 10.0kb downstream 10.0kb downstream 23523 true AmTr_v1.0_scaffold00012: 7078348-7101870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.298 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00012: 7091871-7101870 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049718 5273 Angiosperm View MSA
121345222 5274 Embryophyte View MSA
123426505 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain