Gene : evm_27.TU.AmTr_v1.0_scaffold00011.60 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11247:SF25 - LIPID PHOSPHATE PHOSPHATASE EPSILON 1, CHLOROPLASTIC-RELATED Genomic Order:  58
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00011.60 Secondary Identifier:  ? PAC:31560696
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda TRIGLSYN-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00011.60 0.5kb upstream 0.5kb upstream 4594 true AmTr_v1.0_scaffold00011: 3489236-3493829 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00011: 3493330-3493829 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 0.5kb downstream 0.5kb downstream 4594 true AmTr_v1.0_scaffold00011: 3488736-3493329 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00011: 3488736-3489235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 1.0kb upstream 1.0kb upstream 5094 true AmTr_v1.0_scaffold00011: 3489236-3494329 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00011: 3493330-3494329 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 1.0kb downstream 1.0kb downstream 5094 true AmTr_v1.0_scaffold00011: 3488236-3493329 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00011: 3488236-3489235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 2.0kb upstream 2.0kb upstream 6094 true AmTr_v1.0_scaffold00011: 3489236-3495329 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00011: 3493330-3495329 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 2.0kb downstream 2.0kb downstream 6094 true AmTr_v1.0_scaffold00011: 3487236-3493329 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00011: 3487236-3489235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 5.0kb upstream 5.0kb upstream 9094 true AmTr_v1.0_scaffold00011: 3489236-3498329 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00011: 3493330-3498329 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 5.0kb downstream 5.0kb downstream 9094 true AmTr_v1.0_scaffold00011: 3484236-3493329 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00011: 3484236-3489235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 10.0kb upstream 10.0kb upstream 14094 true AmTr_v1.0_scaffold00011: 3489236-3503329 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00011: 3493330-3503329 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 10.0kb downstream 10.0kb downstream 14094 true AmTr_v1.0_scaffold00011: 3479236-3493329 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.60 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00011: 3479236-3489235 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049888 5273 Angiosperm View MSA
121311632 5274 Embryophyte View MSA
123426780 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain