Gene : evm_27.TU.AmTr_v1.0_scaffold00012.113 A. trichopoda v1.0
Defline:  (1 of 1) PTHR24128:SF14 - E3 UBIQUITIN-PROTEIN LIGASE XBAT31-RELATED Genomic Order:  113
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00012.113 Secondary Identifier:  ? PAC:31553005
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00012.113 0.5kb upstream 0.5kb upstream 5000 true AmTr_v1.0_scaffold00012: 3058784-3063783 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00012: 3058784-3059283 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 0.5kb downstream 0.5kb downstream 5000 true AmTr_v1.0_scaffold00012: 3059284-3064283 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00012: 3063784-3064283 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 1.0kb upstream 1.0kb upstream 5500 true AmTr_v1.0_scaffold00012: 3058284-3063783 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00012: 3058284-3059283 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 1.0kb downstream 1.0kb downstream 5500 true AmTr_v1.0_scaffold00012: 3059284-3064783 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00012: 3063784-3064783 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 2.0kb upstream 2.0kb upstream 6500 true AmTr_v1.0_scaffold00012: 3057284-3063783 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00012: 3057284-3059283 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 2.0kb downstream 2.0kb downstream 6500 true AmTr_v1.0_scaffold00012: 3059284-3065783 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00012: 3063784-3065783 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 5.0kb upstream 5.0kb upstream 9500 true AmTr_v1.0_scaffold00012: 3054284-3063783 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00012: 3054284-3059283 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 5.0kb downstream 5.0kb downstream 9500 true AmTr_v1.0_scaffold00012: 3059284-3068783 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00012: 3063784-3068783 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 10.0kb upstream 10.0kb upstream 14500 true AmTr_v1.0_scaffold00012: 3049284-3063783 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00012: 3049284-3059283 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 10.0kb downstream 10.0kb downstream 14500 true AmTr_v1.0_scaffold00012: 3059284-3073783 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.113 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00012: 3063784-3073783 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045782 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121344984 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain