Gene : evm_27.TU.AmTr_v1.0_scaffold00011.150 A. trichopoda v1.0
Defline:  (1 of 1) PTHR22812 - CHROMOBOX PROTEIN Genomic Order:  146
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00011.150 Secondary Identifier:  ? PAC:31560845
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00011.150 0.5kb upstream 0.5kb upstream 13049 true AmTr_v1.0_scaffold00011: 6245440-6258488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00011: 6245440-6245939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 0.5kb downstream 0.5kb downstream 13049 true AmTr_v1.0_scaffold00011: 6245940-6258988 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00011: 6258489-6258988 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 1.0kb upstream 1.0kb upstream 13549 true AmTr_v1.0_scaffold00011: 6244940-6258488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00011: 6244940-6245939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 1.0kb downstream 1.0kb downstream 13549 true AmTr_v1.0_scaffold00011: 6245940-6259488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00011: 6258489-6259488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 2.0kb upstream 2.0kb upstream 14549 true AmTr_v1.0_scaffold00011: 6243940-6258488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00011: 6243940-6245939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 2.0kb downstream 2.0kb downstream 14549 true AmTr_v1.0_scaffold00011: 6245940-6260488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00011: 6258489-6260488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 5.0kb upstream 5.0kb upstream 17549 true AmTr_v1.0_scaffold00011: 6240940-6258488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00011: 6240940-6245939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 5.0kb downstream 5.0kb downstream 17549 true AmTr_v1.0_scaffold00011: 6245940-6263488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00011: 6258489-6263488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 10.0kb upstream 10.0kb upstream 22549 true AmTr_v1.0_scaffold00011: 6235940-6258488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00011: 6235940-6245939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 10.0kb downstream 10.0kb downstream 22549 true AmTr_v1.0_scaffold00011: 6245940-6268488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.150 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00011: 6258489-6268488 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044379 5273 Angiosperm View MSA
121347782 5274 Embryophyte View MSA
123380626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain