Gene : evm_27.TU.AmTr_v1.0_scaffold00011.195 A. trichopoda v1.0
Defline:  (1 of 2) PTHR24286:SF10 - ABSCISIC ACID 8'-HYDROXYLASE 1-RELATED Genomic Order:  190
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00011.195 Secondary Identifier:  ? PAC:31560881
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5271 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00011.195 0.5kb upstream 0.5kb upstream 4214 true AmTr_v1.0_scaffold00011: 7811884-7816097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00011: 7815598-7816097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 0.5kb downstream 0.5kb downstream 4214 true AmTr_v1.0_scaffold00011: 7811384-7815597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00011: 7811384-7811883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 1.0kb upstream 1.0kb upstream 4714 true AmTr_v1.0_scaffold00011: 7811884-7816597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00011: 7815598-7816597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 1.0kb downstream 1.0kb downstream 4714 true AmTr_v1.0_scaffold00011: 7810884-7815597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00011: 7810884-7811883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 2.0kb upstream 2.0kb upstream 5714 true AmTr_v1.0_scaffold00011: 7811884-7817597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00011: 7815598-7817597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 2.0kb downstream 2.0kb downstream 5714 true AmTr_v1.0_scaffold00011: 7809884-7815597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00011: 7809884-7811883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 5.0kb upstream 5.0kb upstream 8714 true AmTr_v1.0_scaffold00011: 7811884-7820597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00011: 7815598-7820597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 5.0kb downstream 5.0kb downstream 8714 true AmTr_v1.0_scaffold00011: 7806884-7815597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00011: 7806884-7811883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 10.0kb upstream 10.0kb upstream 13714 true AmTr_v1.0_scaffold00011: 7811884-7825597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00011: 7815598-7825597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 10.0kb downstream 10.0kb downstream 13714 true AmTr_v1.0_scaffold00011: 7801884-7815597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.195 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00011: 7801884-7811883 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044932 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121350004 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain