Gene : evm_27.TU.AmTr_v1.0_scaffold00016.120 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC Genomic Order:  117
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00016.120 Secondary Identifier:  ? PAC:31569685
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00016.120 0.5kb upstream 0.5kb upstream 6896 true AmTr_v1.0_scaffold00016: 2567098-2573993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00016: 2573494-2573993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 0.5kb downstream 0.5kb downstream 6896 true AmTr_v1.0_scaffold00016: 2566598-2573493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00016: 2566598-2567097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 1.0kb upstream 1.0kb upstream 7396 true AmTr_v1.0_scaffold00016: 2567098-2574493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00016: 2573494-2574493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 1.0kb downstream 1.0kb downstream 7396 true AmTr_v1.0_scaffold00016: 2566098-2573493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00016: 2566098-2567097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 2.0kb upstream 2.0kb upstream 8396 true AmTr_v1.0_scaffold00016: 2567098-2575493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00016: 2573494-2575493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 2.0kb downstream 2.0kb downstream 8396 true AmTr_v1.0_scaffold00016: 2565098-2573493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00016: 2565098-2567097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 5.0kb upstream 5.0kb upstream 11396 true AmTr_v1.0_scaffold00016: 2567098-2578493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00016: 2573494-2578493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 5.0kb downstream 5.0kb downstream 11396 true AmTr_v1.0_scaffold00016: 2562098-2573493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00016: 2562098-2567097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 10.0kb upstream 10.0kb upstream 16396 true AmTr_v1.0_scaffold00016: 2567098-2583493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00016: 2573494-2583493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 10.0kb downstream 10.0kb downstream 16396 true AmTr_v1.0_scaffold00016: 2557098-2573493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.120 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00016: 2557098-2567097 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047694 5273 Angiosperm View MSA
121345923 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain