Gene : evm_27.TU.AmTr_v1.0_scaffold00013.143 A. trichopoda v1.0
Defline:  (1 of 2) PF10172 - Det1 complexing ubiquitin ligase (DDA1) Genomic Order:  142
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00013.143 Secondary Identifier:  ? PAC:31550879
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00013.143 0.5kb upstream 0.5kb upstream 35280 true AmTr_v1.0_scaffold00013: 3874311-3909590 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00013: 3909091-3909590 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 0.5kb downstream 0.5kb downstream 35280 true AmTr_v1.0_scaffold00013: 3873811-3909090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00013: 3873811-3874310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 1.0kb upstream 1.0kb upstream 35780 true AmTr_v1.0_scaffold00013: 3874311-3910090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00013: 3909091-3910090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 1.0kb downstream 1.0kb downstream 35780 true AmTr_v1.0_scaffold00013: 3873311-3909090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00013: 3873311-3874310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 2.0kb upstream 2.0kb upstream 36780 true AmTr_v1.0_scaffold00013: 3874311-3911090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00013: 3909091-3911090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 2.0kb downstream 2.0kb downstream 36780 true AmTr_v1.0_scaffold00013: 3872311-3909090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00013: 3872311-3874310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 5.0kb upstream 5.0kb upstream 39780 true AmTr_v1.0_scaffold00013: 3874311-3914090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00013: 3909091-3914090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 5.0kb downstream 5.0kb downstream 39780 true AmTr_v1.0_scaffold00013: 3869311-3909090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00013: 3869311-3874310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 10.0kb upstream 10.0kb upstream 44780 true AmTr_v1.0_scaffold00013: 3874311-3919090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00013: 3909091-3919090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 10.0kb downstream 10.0kb downstream 44780 true AmTr_v1.0_scaffold00013: 3864311-3909090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.143 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00013: 3864311-3874310 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045612 5273 Angiosperm View MSA
121347246 5274 Embryophyte View MSA
123425668 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain