Gene : evm_27.TU.AmTr_v1.0_scaffold00013.110 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10457:SF4 - MEVALONATE KINASE Genomic Order:  109
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00013.110 Secondary Identifier:  ? PAC:31550774
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5910 Amborella trichopoda pathologic  
Atrichopoda PWY-922 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00013.110 0.5kb upstream 0.5kb upstream 12942 true AmTr_v1.0_scaffold00013: 3048058-3060999 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00013: 3060500-3060999 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 0.5kb downstream 0.5kb downstream 12942 true AmTr_v1.0_scaffold00013: 3047558-3060499 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00013: 3047558-3048057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 1.0kb upstream 1.0kb upstream 13442 true AmTr_v1.0_scaffold00013: 3048058-3061499 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00013: 3060500-3061499 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 1.0kb downstream 1.0kb downstream 13442 true AmTr_v1.0_scaffold00013: 3047058-3060499 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00013: 3047058-3048057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 2.0kb upstream 2.0kb upstream 14442 true AmTr_v1.0_scaffold00013: 3048058-3062499 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00013: 3060500-3062499 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 2.0kb downstream 2.0kb downstream 14442 true AmTr_v1.0_scaffold00013: 3046058-3060499 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00013: 3046058-3048057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 5.0kb upstream 5.0kb upstream 17442 true AmTr_v1.0_scaffold00013: 3048058-3065499 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00013: 3060500-3065499 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 5.0kb downstream 5.0kb downstream 17442 true AmTr_v1.0_scaffold00013: 3043058-3060499 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00013: 3043058-3048057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 10.0kb upstream 10.0kb upstream 22442 true AmTr_v1.0_scaffold00013: 3048058-3070499 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00013: 3060500-3070499 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 10.0kb downstream 10.0kb downstream 22442 true AmTr_v1.0_scaffold00013: 3038058-3060499 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.110 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00013: 3038058-3048057 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041242 5273 Angiosperm View MSA
121345229 5274 Embryophyte View MSA
123380177 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain