Gene : evm_27.TU.AmTr_v1.0_scaffold00017.173 A. trichopoda v1.0
Defline:  (1 of 22) PTHR22849 - WDSAM1 PROTEIN Genomic Order:  172
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00017.173 Secondary Identifier:  ? PAC:31570025
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7511 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00017.173 0.5kb upstream 0.5kb upstream 1763 true AmTr_v1.0_scaffold00017: 4611070-4612832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00017: 4611070-4611569 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 0.5kb downstream 0.5kb downstream 1763 true AmTr_v1.0_scaffold00017: 4611570-4613332 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00017: 4612833-4613332 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 1.0kb upstream 1.0kb upstream 2263 true AmTr_v1.0_scaffold00017: 4610570-4612832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00017: 4610570-4611569 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 1.0kb downstream 1.0kb downstream 2263 true AmTr_v1.0_scaffold00017: 4611570-4613832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00017: 4612833-4613832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 2.0kb upstream 2.0kb upstream 3263 true AmTr_v1.0_scaffold00017: 4609570-4612832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00017: 4609570-4611569 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 2.0kb downstream 2.0kb downstream 3263 true AmTr_v1.0_scaffold00017: 4611570-4614832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00017: 4612833-4614832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 5.0kb upstream 5.0kb upstream 6263 true AmTr_v1.0_scaffold00017: 4606570-4612832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00017: 4606570-4611569 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 5.0kb downstream 5.0kb downstream 6263 true AmTr_v1.0_scaffold00017: 4611570-4617832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00017: 4612833-4617832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 10.0kb upstream 10.0kb upstream 11263 true AmTr_v1.0_scaffold00017: 4601570-4612832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00017: 4601570-4611569 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 10.0kb downstream 10.0kb downstream 11263 true AmTr_v1.0_scaffold00017: 4611570-4622832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.173 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00017: 4612833-4622832 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045522 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain