Gene : evm_27.TU.AmTr_v1.0_scaffold00018.119 A. trichopoda v1.0
Defline:  (1 of 1) PTHR21433 - TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA Genomic Order:  116
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00018.119 Secondary Identifier:  ? PAC:31557325
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00018.119 0.5kb upstream 0.5kb upstream 28858 true AmTr_v1.0_scaffold00018: 3685663-3714520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00018: 3685663-3686162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 0.5kb downstream 0.5kb downstream 28858 true AmTr_v1.0_scaffold00018: 3686163-3715020 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00018: 3714521-3715020 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 1.0kb upstream 1.0kb upstream 29358 true AmTr_v1.0_scaffold00018: 3685163-3714520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00018: 3685163-3686162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 1.0kb downstream 1.0kb downstream 29358 true AmTr_v1.0_scaffold00018: 3686163-3715520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00018: 3714521-3715520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 2.0kb upstream 2.0kb upstream 30358 true AmTr_v1.0_scaffold00018: 3684163-3714520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00018: 3684163-3686162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 2.0kb downstream 2.0kb downstream 30358 true AmTr_v1.0_scaffold00018: 3686163-3716520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00018: 3714521-3716520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 5.0kb upstream 5.0kb upstream 33358 true AmTr_v1.0_scaffold00018: 3681163-3714520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00018: 3681163-3686162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 5.0kb downstream 5.0kb downstream 33358 true AmTr_v1.0_scaffold00018: 3686163-3719520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00018: 3714521-3719520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 10.0kb upstream 10.0kb upstream 38358 true AmTr_v1.0_scaffold00018: 3676163-3714520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00018: 3676163-3686162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 10.0kb downstream 10.0kb downstream 38358 true AmTr_v1.0_scaffold00018: 3686163-3724520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.119 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00018: 3714521-3724520 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046309 5273 Angiosperm View MSA
121351059 5274 Embryophyte View MSA
123427435 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain