Gene : evm_27.TU.AmTr_v1.0_scaffold00017.99 A. trichopoda v1.0
Defline:  (1 of 1) 1.14.19.4 - Delta(8)-fatty-acid desaturase / SLD Genomic Order:  98
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00017.99 Secondary Identifier:  ? PAC:31569968
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7601 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00017.99 0.5kb upstream 0.5kb upstream 1913 true AmTr_v1.0_scaffold00017: 3146585-3148497 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00017: 3147998-3148497 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 0.5kb downstream 0.5kb downstream 1913 true AmTr_v1.0_scaffold00017: 3146085-3147997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00017: 3146085-3146584 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 1.0kb upstream 1.0kb upstream 2413 true AmTr_v1.0_scaffold00017: 3146585-3148997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00017: 3147998-3148997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 1.0kb downstream 1.0kb downstream 2413 true AmTr_v1.0_scaffold00017: 3145585-3147997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00017: 3145585-3146584 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 2.0kb upstream 2.0kb upstream 3413 true AmTr_v1.0_scaffold00017: 3146585-3149997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00017: 3147998-3149997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 2.0kb downstream 2.0kb downstream 3413 true AmTr_v1.0_scaffold00017: 3144585-3147997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00017: 3144585-3146584 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 5.0kb upstream 5.0kb upstream 6413 true AmTr_v1.0_scaffold00017: 3146585-3152997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00017: 3147998-3152997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 5.0kb downstream 5.0kb downstream 6413 true AmTr_v1.0_scaffold00017: 3141585-3147997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00017: 3141585-3146584 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 10.0kb upstream 10.0kb upstream 11413 true AmTr_v1.0_scaffold00017: 3146585-3157997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00017: 3147998-3157997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 10.0kb downstream 10.0kb downstream 11413 true AmTr_v1.0_scaffold00017: 3136585-3147997 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.99 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00017: 3136585-3146584 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047499 5273 Angiosperm View MSA
121347259 5274 Embryophyte View MSA
123427370 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain