Gene : evm_27.TU.AmTr_v1.0_scaffold00021.87 A. trichopoda v1.0
Defline:  (1 of 8) 1.1.1.37 - Malate dehydrogenase / Malic dehydrogenase Genomic Order:  87
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00021.87 Secondary Identifier:  ? PAC:31563375
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda GLUCONEO-PWY Amborella trichopoda pathologic  
Atrichopoda GLYOXYLATE-BYPASS Amborella trichopoda pathologic  
Atrichopoda PWY-5464 Amborella trichopoda pathologic  
Atrichopoda PWY-561 Amborella trichopoda pathologic  
Atrichopoda PWY-5690 Amborella trichopoda pathologic  
Atrichopoda PWY-7115 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00021.87 0.5kb upstream 0.5kb upstream 11279 true AmTr_v1.0_scaffold00021: 1861609-1872887 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00021: 1872388-1872887 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 0.5kb downstream 0.5kb downstream 11279 true AmTr_v1.0_scaffold00021: 1861109-1872387 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00021: 1861109-1861608 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 1.0kb upstream 1.0kb upstream 11779 true AmTr_v1.0_scaffold00021: 1861609-1873387 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00021: 1872388-1873387 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 1.0kb downstream 1.0kb downstream 11779 true AmTr_v1.0_scaffold00021: 1860609-1872387 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00021: 1860609-1861608 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 2.0kb upstream 2.0kb upstream 12779 true AmTr_v1.0_scaffold00021: 1861609-1874387 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00021: 1872388-1874387 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 2.0kb downstream 2.0kb downstream 12779 true AmTr_v1.0_scaffold00021: 1859609-1872387 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00021: 1859609-1861608 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 5.0kb upstream 5.0kb upstream 15779 true AmTr_v1.0_scaffold00021: 1861609-1877387 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00021: 1872388-1877387 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 5.0kb downstream 5.0kb downstream 15779 true AmTr_v1.0_scaffold00021: 1856609-1872387 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00021: 1856609-1861608 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 10.0kb upstream 10.0kb upstream 20779 true AmTr_v1.0_scaffold00021: 1861609-1882387 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00021: 1872388-1882387 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 10.0kb downstream 10.0kb downstream 20779 true AmTr_v1.0_scaffold00021: 1851609-1872387 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.87 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00021: 1851609-1861608 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042635 5273 Angiosperm View MSA
121345492 5274 Embryophyte View MSA
123423974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain