Gene : evm_27.TU.AmTr_v1.0_scaffold00021.163 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12499 - OPTIC ATROPHY 3 PROTEIN OPA3 Genomic Order:  162
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00021.163 Secondary Identifier:  ? PAC:31563317
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00021.163 0.5kb upstream 0.5kb upstream 18027 true AmTr_v1.0_scaffold00021: 3646996-3665022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00021: 3646996-3647495 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 0.5kb downstream 0.5kb downstream 18027 true AmTr_v1.0_scaffold00021: 3647496-3665522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00021: 3665023-3665522 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 1.0kb upstream 1.0kb upstream 18527 true AmTr_v1.0_scaffold00021: 3646496-3665022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00021: 3646496-3647495 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 1.0kb downstream 1.0kb downstream 18527 true AmTr_v1.0_scaffold00021: 3647496-3666022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00021: 3665023-3666022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 2.0kb upstream 2.0kb upstream 19527 true AmTr_v1.0_scaffold00021: 3645496-3665022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00021: 3645496-3647495 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 2.0kb downstream 2.0kb downstream 19527 true AmTr_v1.0_scaffold00021: 3647496-3667022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00021: 3665023-3667022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 5.0kb upstream 5.0kb upstream 22527 true AmTr_v1.0_scaffold00021: 3642496-3665022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00021: 3642496-3647495 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 5.0kb downstream 5.0kb downstream 22527 true AmTr_v1.0_scaffold00021: 3647496-3670022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00021: 3665023-3670022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 10.0kb upstream 10.0kb upstream 27527 true AmTr_v1.0_scaffold00021: 3637496-3665022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00021: 3637496-3647495 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 10.0kb downstream 10.0kb downstream 27527 true AmTr_v1.0_scaffold00021: 3647496-3675022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.163 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00021: 3665023-3675022 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047456 5273 Angiosperm View MSA
121344261 5274 Embryophyte View MSA
123428065 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain