Gene : evm_27.TU.AmTr_v1.0_scaffold00021.228 A. trichopoda v1.0
Defline:  (1 of 2) PTHR13402 - RGPR-RELATED Genomic Order:  227
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00021.228 Secondary Identifier:  ? PAC:31563332
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00021.228 0.5kb upstream 0.5kb upstream 10863 true AmTr_v1.0_scaffold00021: 4996463-5007325 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00021: 4996463-4996962 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 0.5kb downstream 0.5kb downstream 10863 true AmTr_v1.0_scaffold00021: 4996963-5007825 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00021: 5007326-5007825 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 1.0kb upstream 1.0kb upstream 11363 true AmTr_v1.0_scaffold00021: 4995963-5007325 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00021: 4995963-4996962 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 1.0kb downstream 1.0kb downstream 11363 true AmTr_v1.0_scaffold00021: 4996963-5008325 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00021: 5007326-5008325 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 2.0kb upstream 2.0kb upstream 12363 true AmTr_v1.0_scaffold00021: 4994963-5007325 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00021: 4994963-4996962 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 2.0kb downstream 2.0kb downstream 12363 true AmTr_v1.0_scaffold00021: 4996963-5009325 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00021: 5007326-5009325 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 5.0kb upstream 5.0kb upstream 15363 true AmTr_v1.0_scaffold00021: 4991963-5007325 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00021: 4991963-4996962 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 5.0kb downstream 5.0kb downstream 15363 true AmTr_v1.0_scaffold00021: 4996963-5012325 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00021: 5007326-5012325 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 10.0kb upstream 10.0kb upstream 20363 true AmTr_v1.0_scaffold00021: 4986963-5007325 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00021: 4986963-4996962 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 10.0kb downstream 10.0kb downstream 20363 true AmTr_v1.0_scaffold00021: 4996963-5017325 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.228 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00021: 5007326-5017325 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051498 5273 Angiosperm View MSA
121349781 5274 Embryophyte View MSA
123425826 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain