Gene : evm_27.TU.AmTr_v1.0_scaffold00022.359 A. trichopoda v1.0
Defline:  (1 of 4) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Genomic Order:  357
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00022.359 Secondary Identifier:  ? PAC:31552422
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00022.359 0.5kb upstream 0.5kb upstream 12294 true AmTr_v1.0_scaffold00022: 5876601-5888894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00022: 5876601-5877100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 0.5kb downstream 0.5kb downstream 12294 true AmTr_v1.0_scaffold00022: 5877101-5889394 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00022: 5888895-5889394 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 1.0kb upstream 1.0kb upstream 12794 true AmTr_v1.0_scaffold00022: 5876101-5888894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00022: 5876101-5877100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 1.0kb downstream 1.0kb downstream 12794 true AmTr_v1.0_scaffold00022: 5877101-5889894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00022: 5888895-5889894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 2.0kb upstream 2.0kb upstream 13794 true AmTr_v1.0_scaffold00022: 5875101-5888894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00022: 5875101-5877100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 2.0kb downstream 2.0kb downstream 13794 true AmTr_v1.0_scaffold00022: 5877101-5890894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00022: 5888895-5890894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 5.0kb upstream 5.0kb upstream 16794 true AmTr_v1.0_scaffold00022: 5872101-5888894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00022: 5872101-5877100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 5.0kb downstream 5.0kb downstream 16794 true AmTr_v1.0_scaffold00022: 5877101-5893894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00022: 5888895-5893894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 10.0kb upstream 10.0kb upstream 21794 true AmTr_v1.0_scaffold00022: 5867101-5888894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00022: 5867101-5877100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 10.0kb downstream 10.0kb downstream 21794 true AmTr_v1.0_scaffold00022: 5877101-5898894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.359 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00022: 5888895-5898894 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042760 5273 Angiosperm View MSA
121351146 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain