Gene : evm_27.TU.AmTr_v1.0_scaffold00025.169 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 Genomic Order:  169
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.169 Secondary Identifier:  ? PAC:31566418
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.169 0.5kb upstream 0.5kb upstream 29073 true AmTr_v1.0_scaffold00025: 2222704-2251776 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 2251277-2251776 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 0.5kb downstream 0.5kb downstream 29073 true AmTr_v1.0_scaffold00025: 2222204-2251276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 2222204-2222703 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 1.0kb upstream 1.0kb upstream 29573 true AmTr_v1.0_scaffold00025: 2222704-2252276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 2251277-2252276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 1.0kb downstream 1.0kb downstream 29573 true AmTr_v1.0_scaffold00025: 2221704-2251276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 2221704-2222703 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 2.0kb upstream 2.0kb upstream 30573 true AmTr_v1.0_scaffold00025: 2222704-2253276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 2251277-2253276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 2.0kb downstream 2.0kb downstream 30573 true AmTr_v1.0_scaffold00025: 2220704-2251276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 2220704-2222703 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 5.0kb upstream 5.0kb upstream 33573 true AmTr_v1.0_scaffold00025: 2222704-2256276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 2251277-2256276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 5.0kb downstream 5.0kb downstream 33573 true AmTr_v1.0_scaffold00025: 2217704-2251276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 2217704-2222703 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 10.0kb upstream 10.0kb upstream 38573 true AmTr_v1.0_scaffold00025: 2222704-2261276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 2251277-2261276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 10.0kb downstream 10.0kb downstream 38573 true AmTr_v1.0_scaffold00025: 2212704-2251276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.169 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 2212704-2222703 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045949 5273 Angiosperm View MSA
121346093 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain