Protein : evm_27.model.AmTr_v1.0_scaffold00025.169 A. trichopoda v1.0
UniProt Accession:  ? W1PY88 Secondary Identifier:  PAC:31566418
Organism Name:  Amborella trichopoda Length:  1120  
Name:  evm_27.model.AmTr_v1.0_scaffold00025.169
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SummaryProteinsOther
 

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Proteins

7 Protein Domains

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold
IPR001357 Domain BRCT domain
IPR012310 Domain DNA ligase, ATP-dependent, central
IPR012308 Domain DNA ligase, ATP-dependent, N-terminal
IPR012309 Domain DNA ligase, ATP-dependent, C-terminal
IPR000977 Family DNA ligase, ATP-dependent
IPR021536 Domain DNA ligase IV domain
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
evm_27.model.AmTr_v1.0_scaffold00025.169_CDS 3363   AmTr_v1.0_scaffold00025: 2222704-2251276 Amborella trichopoda

34 Ontology Annotations

Ontology Term Db Gene/Protein Name
SSF56091 SSF evm_27.model.AmTr_v1.0_scaffold00025.169
SSF52113 SSF evm_27.model.AmTr_v1.0_scaffold00025.169
TIGR00574 TIGRFAMs evm_27.model.AmTr_v1.0_scaffold00025.169
W1PY88 UniProt evm_27.model.AmTr_v1.0_scaffold00025.169
IPR012340 InterPro evm_27.model.AmTr_v1.0_scaffold00025.169
K10777 KEGG evm_27.model.AmTr_v1.0_scaffold00025.169
IPR021536 InterPro evm_27.model.AmTr_v1.0_scaffold00025.169
PTHR10459:SF72 PANTHER evm_27.model.AmTr_v1.0_scaffold00025.169
PTHR10459 PANTHER evm_27.model.AmTr_v1.0_scaffold00025.169
PF01068 PFAM evm_27.model.AmTr_v1.0_scaffold00025.169
PF00533 PFAM evm_27.model.AmTr_v1.0_scaffold00025.169
PF04679 PFAM evm_27.model.AmTr_v1.0_scaffold00025.169
PF04675 PFAM evm_27.model.AmTr_v1.0_scaffold00025.169
PS50160 PROFILE evm_27.model.AmTr_v1.0_scaffold00025.169
PF11411 PFAM evm_27.model.AmTr_v1.0_scaffold00025.169
SM00292 SMART evm_27.model.AmTr_v1.0_scaffold00025.169
PS50172 PROFILE evm_27.model.AmTr_v1.0_scaffold00025.169
SSF50249 SSF evm_27.model.AmTr_v1.0_scaffold00025.169
SSF117018 SSF evm_27.model.AmTr_v1.0_scaffold00025.169
6.5.1.1 ENZYME evm_27.model.AmTr_v1.0_scaffold00025.169
GO:0003677 GO evm_27.model.AmTr_v1.0_scaffold00025.169
G3DSA:3.40.50.10190 GENE3D evm_27.model.AmTr_v1.0_scaffold00025.169
GO:0005524 GO evm_27.model.AmTr_v1.0_scaffold00025.169
GO:0003910 GO evm_27.model.AmTr_v1.0_scaffold00025.169
GO:0006260 GO evm_27.model.AmTr_v1.0_scaffold00025.169
GO:0005622 GO evm_27.model.AmTr_v1.0_scaffold00025.169
GO:0006310 GO evm_27.model.AmTr_v1.0_scaffold00025.169
GO:0006281 GO evm_27.model.AmTr_v1.0_scaffold00025.169
IPR000977 InterPro evm_27.model.AmTr_v1.0_scaffold00025.169
GO:0071897 GO evm_27.model.AmTr_v1.0_scaffold00025.169

0 Pathway Components

0 Pathways