Gene : evm_27.TU.AmTr_v1.0_scaffold00025.165 A. trichopoda v1.0

Defline:  (1 of 2) PTHR19297//PTHR19297:SF70 - GLYCOSYLTRANSFERASE 14 FAMILY MEMBER Genomic Order:  165
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.165 Secondary Identifier:  ? PAC:31566363

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.165 0.5kb upstream 0.5kb upstream 6412 true AmTr_v1.0_scaffold00025: 2172974-2179385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 2178886-2179385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 0.5kb downstream 0.5kb downstream 6412 true AmTr_v1.0_scaffold00025: 2172474-2178885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 2172474-2172973 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 1.0kb upstream 1.0kb upstream 6912 true AmTr_v1.0_scaffold00025: 2172974-2179885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 2178886-2179885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 1.0kb downstream 1.0kb downstream 6912 true AmTr_v1.0_scaffold00025: 2171974-2178885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 2171974-2172973 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 2.0kb upstream 2.0kb upstream 7912 true AmTr_v1.0_scaffold00025: 2172974-2180885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 2178886-2180885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 2.0kb downstream 2.0kb downstream 7912 true AmTr_v1.0_scaffold00025: 2170974-2178885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 2170974-2172973 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 5.0kb upstream 5.0kb upstream 10912 true AmTr_v1.0_scaffold00025: 2172974-2183885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 2178886-2183885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 5.0kb downstream 5.0kb downstream 10912 true AmTr_v1.0_scaffold00025: 2167974-2178885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 2167974-2172973 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 10.0kb upstream 10.0kb upstream 15912 true AmTr_v1.0_scaffold00025: 2172974-2188885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 2178886-2188885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 10.0kb downstream 10.0kb downstream 15912 true AmTr_v1.0_scaffold00025: 2162974-2178885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.165 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 2162974-2172973 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050409 5273 Angiosperm View MSA
121311894 5274 Embryophyte View MSA
123349128 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain