Gene : evm_27.TU.AmTr_v1.0_scaffold00025.16 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11472:SF1 - TFIIH BASAL TRANSCRIPTION FACTOR COMPLEX HELICASE XPD SUBUNIT Genomic Order:  16
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.16 Secondary Identifier:  ? PAC:31566629
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.16 0.5kb upstream 0.5kb upstream 14978 true AmTr_v1.0_scaffold00025: 309379-324356 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 323857-324356 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 0.5kb downstream 0.5kb downstream 14978 true AmTr_v1.0_scaffold00025: 308879-323856 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 308879-309378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 1.0kb upstream 1.0kb upstream 15478 true AmTr_v1.0_scaffold00025: 309379-324856 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 323857-324856 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 1.0kb downstream 1.0kb downstream 15478 true AmTr_v1.0_scaffold00025: 308379-323856 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 308379-309378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 2.0kb upstream 2.0kb upstream 16478 true AmTr_v1.0_scaffold00025: 309379-325856 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 323857-325856 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 2.0kb downstream 2.0kb downstream 16478 true AmTr_v1.0_scaffold00025: 307379-323856 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 307379-309378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 5.0kb upstream 5.0kb upstream 19478 true AmTr_v1.0_scaffold00025: 309379-328856 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 323857-328856 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 5.0kb downstream 5.0kb downstream 19478 true AmTr_v1.0_scaffold00025: 304379-323856 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 304379-309378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 10.0kb upstream 10.0kb upstream 24478 true AmTr_v1.0_scaffold00025: 309379-333856 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 323857-333856 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 10.0kb downstream 10.0kb downstream 24478 true AmTr_v1.0_scaffold00025: 299379-323856 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.16 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 299379-309378 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046497 5273 Angiosperm View MSA
121344254 5274 Embryophyte View MSA
123426727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain