Gene : evm_27.TU.AmTr_v1.0_scaffold00025.144 A. trichopoda v1.0
Defline:  (1 of 1) PTHR37236:SF1 - AUXIN-BINDING PROTEIN 1 Genomic Order:  144
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.144 Secondary Identifier:  ? PAC:31566419
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.144 0.5kb upstream 0.5kb upstream 5665 true AmTr_v1.0_scaffold00025: 1950279-1955943 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 1955444-1955943 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 0.5kb downstream 0.5kb downstream 5665 true AmTr_v1.0_scaffold00025: 1949779-1955443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 1949779-1950278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 1.0kb upstream 1.0kb upstream 6165 true AmTr_v1.0_scaffold00025: 1950279-1956443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 1955444-1956443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 1.0kb downstream 1.0kb downstream 6165 true AmTr_v1.0_scaffold00025: 1949279-1955443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 1949279-1950278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 2.0kb upstream 2.0kb upstream 7165 true AmTr_v1.0_scaffold00025: 1950279-1957443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 1955444-1957443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 2.0kb downstream 2.0kb downstream 7165 true AmTr_v1.0_scaffold00025: 1948279-1955443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 1948279-1950278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 5.0kb upstream 5.0kb upstream 10165 true AmTr_v1.0_scaffold00025: 1950279-1960443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 1955444-1960443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 5.0kb downstream 5.0kb downstream 10165 true AmTr_v1.0_scaffold00025: 1945279-1955443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 1945279-1950278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 10.0kb upstream 10.0kb upstream 15165 true AmTr_v1.0_scaffold00025: 1950279-1965443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 1955444-1965443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 10.0kb downstream 10.0kb downstream 15165 true AmTr_v1.0_scaffold00025: 1940279-1955443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.144 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 1940279-1950278 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049427 5273 Angiosperm View MSA
121346924 5274 Embryophyte View MSA
123426893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain