Gene : evm_27.TU.AmTr_v1.0_scaffold00025.130 A. trichopoda v1.0
Defline:  (1 of 2) PTHR10182 - CALCIUM-BINDING PROTEIN 39-RELATED Genomic Order:  130
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.130 Secondary Identifier:  ? PAC:31566338
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.130 0.5kb upstream 0.5kb upstream 4839 true AmTr_v1.0_scaffold00025: 1814768-1819606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 1814768-1815267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 0.5kb downstream 0.5kb downstream 4839 true AmTr_v1.0_scaffold00025: 1815268-1820106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 1819607-1820106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 1.0kb upstream 1.0kb upstream 5339 true AmTr_v1.0_scaffold00025: 1814268-1819606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 1814268-1815267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 1.0kb downstream 1.0kb downstream 5339 true AmTr_v1.0_scaffold00025: 1815268-1820606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 1819607-1820606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 2.0kb upstream 2.0kb upstream 6339 true AmTr_v1.0_scaffold00025: 1813268-1819606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 1813268-1815267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 2.0kb downstream 2.0kb downstream 6339 true AmTr_v1.0_scaffold00025: 1815268-1821606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 1819607-1821606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 5.0kb upstream 5.0kb upstream 9339 true AmTr_v1.0_scaffold00025: 1810268-1819606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 1810268-1815267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 5.0kb downstream 5.0kb downstream 9339 true AmTr_v1.0_scaffold00025: 1815268-1824606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 1819607-1824606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 10.0kb upstream 10.0kb upstream 14339 true AmTr_v1.0_scaffold00025: 1805268-1819606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 1805268-1815267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 10.0kb downstream 10.0kb downstream 14339 true AmTr_v1.0_scaffold00025: 1815268-1829606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.130 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 1819607-1829606 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042724 5273 Angiosperm View MSA
121345752 5274 Embryophyte View MSA
123425225 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain