Gene : evm_27.TU.AmTr_v1.0_scaffold00024.341 A. trichopoda v1.0
Defline:  (1 of 464) PF01535 - PPR repeat (PPR) Genomic Order:  337
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00024.341 Secondary Identifier:  ? PAC:31558507
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00024.341 0.5kb upstream 0.5kb upstream 11918 true AmTr_v1.0_scaffold00024: 6473924-6485841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00024: 6473924-6474423 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 0.5kb downstream 0.5kb downstream 11918 true AmTr_v1.0_scaffold00024: 6474424-6486341 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00024: 6485842-6486341 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 1.0kb upstream 1.0kb upstream 12418 true AmTr_v1.0_scaffold00024: 6473424-6485841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00024: 6473424-6474423 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 1.0kb downstream 1.0kb downstream 12418 true AmTr_v1.0_scaffold00024: 6474424-6486841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00024: 6485842-6486841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 2.0kb upstream 2.0kb upstream 13418 true AmTr_v1.0_scaffold00024: 6472424-6485841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00024: 6472424-6474423 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 2.0kb downstream 2.0kb downstream 13418 true AmTr_v1.0_scaffold00024: 6474424-6487841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00024: 6485842-6487841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 5.0kb upstream 5.0kb upstream 16418 true AmTr_v1.0_scaffold00024: 6469424-6485841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00024: 6469424-6474423 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 5.0kb downstream 5.0kb downstream 16418 true AmTr_v1.0_scaffold00024: 6474424-6490841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00024: 6485842-6490841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 10.0kb upstream 10.0kb upstream 21418 true AmTr_v1.0_scaffold00024: 6464424-6485841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00024: 6464424-6474423 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 10.0kb downstream 10.0kb downstream 21418 true AmTr_v1.0_scaffold00024: 6474424-6495841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.341 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00024: 6485842-6495841 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain