Gene : evm_27.TU.AmTr_v1.0_scaffold00023.3 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11206:SF101 - MATE EFFLUX FAMILY PROTEIN 2, CHLOROPLASTIC Genomic Order:  3
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00023.3 Secondary Identifier:  ? PAC:31573902
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00023.3 0.5kb upstream 0.5kb upstream 7665 true AmTr_v1.0_scaffold00023: 14427-22091 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00023: 21592-22091 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 0.5kb downstream 0.5kb downstream 7665 true AmTr_v1.0_scaffold00023: 13927-21591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00023: 13927-14426 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 1.0kb upstream 1.0kb upstream 8165 true AmTr_v1.0_scaffold00023: 14427-22591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00023: 21592-22591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 1.0kb downstream 1.0kb downstream 8165 true AmTr_v1.0_scaffold00023: 13427-21591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00023: 13427-14426 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 2.0kb upstream 2.0kb upstream 9165 true AmTr_v1.0_scaffold00023: 14427-23591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00023: 21592-23591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 2.0kb downstream 2.0kb downstream 9165 true AmTr_v1.0_scaffold00023: 12427-21591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00023: 12427-14426 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 5.0kb upstream 5.0kb upstream 12165 true AmTr_v1.0_scaffold00023: 14427-26591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00023: 21592-26591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 5.0kb downstream 5.0kb downstream 12165 true AmTr_v1.0_scaffold00023: 9427-21591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00023: 9427-14426 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 10.0kb upstream 10.0kb upstream 17165 true AmTr_v1.0_scaffold00023: 14427-31591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00023: 21592-31591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 10.0kb downstream 10.0kb downstream 17165 true AmTr_v1.0_scaffold00023: 4427-21591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.3 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00023: 4427-14426 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046968 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain