Gene : evm_27.TU.AmTr_v1.0_scaffold00025.71 A. trichopoda v1.0
Defline:  (1 of 9) PF09335 - SNARE associated Golgi protein (SNARE_assoc) Genomic Order:  71
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.71 Secondary Identifier:  ? PAC:31566646
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.71 0.5kb upstream 0.5kb upstream 7791 true AmTr_v1.0_scaffold00025: 1023453-1031243 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 1030744-1031243 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 0.5kb downstream 0.5kb downstream 7791 true AmTr_v1.0_scaffold00025: 1022953-1030743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 1022953-1023452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 1.0kb upstream 1.0kb upstream 8291 true AmTr_v1.0_scaffold00025: 1023453-1031743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 1030744-1031743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 1.0kb downstream 1.0kb downstream 8291 true AmTr_v1.0_scaffold00025: 1022453-1030743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 1022453-1023452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 2.0kb upstream 2.0kb upstream 9291 true AmTr_v1.0_scaffold00025: 1023453-1032743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 1030744-1032743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 2.0kb downstream 2.0kb downstream 9291 true AmTr_v1.0_scaffold00025: 1021453-1030743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 1021453-1023452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 5.0kb upstream 5.0kb upstream 12291 true AmTr_v1.0_scaffold00025: 1023453-1035743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 1030744-1035743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 5.0kb downstream 5.0kb downstream 12291 true AmTr_v1.0_scaffold00025: 1018453-1030743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 1018453-1023452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 10.0kb upstream 10.0kb upstream 17291 true AmTr_v1.0_scaffold00025: 1023453-1040743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 1030744-1040743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 10.0kb downstream 10.0kb downstream 17291 true AmTr_v1.0_scaffold00025: 1013453-1030743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.71 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 1013453-1023452 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051271 5273 Angiosperm View MSA
121349848 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain