Gene : evm_27.TU.AmTr_v1.0_scaffold00025.330 A. trichopoda v1.0
Defline:  (1 of 3) PF14604 - Variant SH3 domain (SH3_9) Genomic Order:  330
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.330 Secondary Identifier:  ? PAC:31566538
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.330 0.5kb upstream 0.5kb upstream 19397 true AmTr_v1.0_scaffold00025: 4839306-4858702 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 4858203-4858702 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 0.5kb downstream 0.5kb downstream 19397 true AmTr_v1.0_scaffold00025: 4838806-4858202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 4838806-4839305 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 1.0kb upstream 1.0kb upstream 19897 true AmTr_v1.0_scaffold00025: 4839306-4859202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 4858203-4859202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 1.0kb downstream 1.0kb downstream 19897 true AmTr_v1.0_scaffold00025: 4838306-4858202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 4838306-4839305 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 2.0kb upstream 2.0kb upstream 20897 true AmTr_v1.0_scaffold00025: 4839306-4860202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 4858203-4860202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 2.0kb downstream 2.0kb downstream 20897 true AmTr_v1.0_scaffold00025: 4837306-4858202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 4837306-4839305 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 5.0kb upstream 5.0kb upstream 23897 true AmTr_v1.0_scaffold00025: 4839306-4863202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 4858203-4863202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 5.0kb downstream 5.0kb downstream 23897 true AmTr_v1.0_scaffold00025: 4834306-4858202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 4834306-4839305 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 10.0kb upstream 10.0kb upstream 28897 true AmTr_v1.0_scaffold00025: 4839306-4868202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 4858203-4868202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 10.0kb downstream 10.0kb downstream 28897 true AmTr_v1.0_scaffold00025: 4829306-4858202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.330 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 4829306-4839305 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044130 5273 Angiosperm View MSA
121348962 5274 Embryophyte View MSA
123428583 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain