Gene : evm_27.TU.AmTr_v1.0_scaffold00029.376 A. trichopoda v1.0
Defline:  (1 of 1) PTHR31412:SF5 - ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED Genomic Order:  376
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00029.376 Secondary Identifier:  ? PAC:31549996
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00029.376 0.5kb upstream 0.5kb upstream 27700 true AmTr_v1.0_scaffold00029: 5121863-5149562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00029: 5121863-5122362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 0.5kb downstream 0.5kb downstream 27700 true AmTr_v1.0_scaffold00029: 5122363-5150062 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00029: 5149563-5150062 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 1.0kb upstream 1.0kb upstream 28200 true AmTr_v1.0_scaffold00029: 5121363-5149562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00029: 5121363-5122362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 1.0kb downstream 1.0kb downstream 28200 true AmTr_v1.0_scaffold00029: 5122363-5150562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00029: 5149563-5150562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 2.0kb upstream 2.0kb upstream 29200 true AmTr_v1.0_scaffold00029: 5120363-5149562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00029: 5120363-5122362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 2.0kb downstream 2.0kb downstream 29200 true AmTr_v1.0_scaffold00029: 5122363-5151562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00029: 5149563-5151562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 5.0kb upstream 5.0kb upstream 32200 true AmTr_v1.0_scaffold00029: 5117363-5149562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00029: 5117363-5122362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 5.0kb downstream 5.0kb downstream 32200 true AmTr_v1.0_scaffold00029: 5122363-5154562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00029: 5149563-5154562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 10.0kb upstream 10.0kb upstream 37200 true AmTr_v1.0_scaffold00029: 5112363-5149562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00029: 5112363-5122362 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 10.0kb downstream 10.0kb downstream 37200 true AmTr_v1.0_scaffold00029: 5122363-5159562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.376 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00029: 5149563-5159562 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044367 5273 Angiosperm View MSA
121345535 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain