Gene : evm_27.TU.AmTr_v1.0_scaffold00029.238 A. trichopoda v1.0
Defline:  (1 of 1) PTHR21402:SF10 - U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 48 KDA PROTEIN Genomic Order:  238
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00029.238 Secondary Identifier:  ? PAC:31549859
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00029.238 0.5kb upstream 0.5kb upstream 6078 true AmTr_v1.0_scaffold00029: 2978867-2984944 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00029: 2984445-2984944 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 0.5kb downstream 0.5kb downstream 6078 true AmTr_v1.0_scaffold00029: 2978367-2984444 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00029: 2978367-2978866 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 1.0kb upstream 1.0kb upstream 6578 true AmTr_v1.0_scaffold00029: 2978867-2985444 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00029: 2984445-2985444 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 1.0kb downstream 1.0kb downstream 6578 true AmTr_v1.0_scaffold00029: 2977867-2984444 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00029: 2977867-2978866 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 2.0kb upstream 2.0kb upstream 7578 true AmTr_v1.0_scaffold00029: 2978867-2986444 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00029: 2984445-2986444 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 2.0kb downstream 2.0kb downstream 7578 true AmTr_v1.0_scaffold00029: 2976867-2984444 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00029: 2976867-2978866 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 5.0kb upstream 5.0kb upstream 10578 true AmTr_v1.0_scaffold00029: 2978867-2989444 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00029: 2984445-2989444 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 5.0kb downstream 5.0kb downstream 10578 true AmTr_v1.0_scaffold00029: 2973867-2984444 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00029: 2973867-2978866 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 10.0kb upstream 10.0kb upstream 15578 true AmTr_v1.0_scaffold00029: 2978867-2994444 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00029: 2984445-2994444 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 10.0kb downstream 10.0kb downstream 15578 true AmTr_v1.0_scaffold00029: 2968867-2984444 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.238 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00029: 2968867-2978866 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044714 5273 Angiosperm View MSA
121344837 5274 Embryophyte View MSA
123380110 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain