Gene : evm_27.TU.AmTr_v1.0_scaffold00029.1 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10799:SF777 - DNA-BINDING PROTEIN-RELATED Genomic Order:  1
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00029.1 Secondary Identifier:  ? PAC:31549946
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00029.1 0.5kb upstream 0.5kb upstream 11286 true AmTr_v1.0_scaffold00029: 20308-31593 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00029: 20308-20807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 0.5kb downstream 0.5kb downstream 11286 true AmTr_v1.0_scaffold00029: 20808-32093 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00029: 31594-32093 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 1.0kb upstream 1.0kb upstream 11786 true AmTr_v1.0_scaffold00029: 19808-31593 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00029: 19808-20807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 1.0kb downstream 1.0kb downstream 11786 true AmTr_v1.0_scaffold00029: 20808-32593 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00029: 31594-32593 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 2.0kb upstream 2.0kb upstream 12786 true AmTr_v1.0_scaffold00029: 18808-31593 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00029: 18808-20807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 2.0kb downstream 2.0kb downstream 12786 true AmTr_v1.0_scaffold00029: 20808-33593 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00029: 31594-33593 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 5.0kb upstream 5.0kb upstream 15786 true AmTr_v1.0_scaffold00029: 15808-31593 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00029: 15808-20807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 5.0kb downstream 5.0kb downstream 15786 true AmTr_v1.0_scaffold00029: 20808-36593 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00029: 31594-36593 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 10.0kb upstream 10.0kb upstream 20786 true AmTr_v1.0_scaffold00029: 10808-31593 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00029: 10808-20807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 10.0kb downstream 10.0kb downstream 20786 true AmTr_v1.0_scaffold00029: 20808-41593 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.1 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00029: 31594-41593 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048342 5273 Angiosperm View MSA
121347136 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain