Gene : evm_27.TU.AmTr_v1.0_scaffold00029.154 A. trichopoda v1.0
Defline:  (1 of 5) PF05757 - Oxygen evolving enhancer protein 3 (PsbQ) (PsbQ) Genomic Order:  154
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00029.154 Secondary Identifier:  ? PAC:31549931
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00029.154 0.5kb upstream 0.5kb upstream 2332 true AmTr_v1.0_scaffold00029: 1882037-1884368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00029: 1883869-1884368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 0.5kb downstream 0.5kb downstream 2332 true AmTr_v1.0_scaffold00029: 1881537-1883868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00029: 1881537-1882036 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 1.0kb upstream 1.0kb upstream 2832 true AmTr_v1.0_scaffold00029: 1882037-1884868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00029: 1883869-1884868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 1.0kb downstream 1.0kb downstream 2832 true AmTr_v1.0_scaffold00029: 1881037-1883868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00029: 1881037-1882036 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 2.0kb upstream 2.0kb upstream 3832 true AmTr_v1.0_scaffold00029: 1882037-1885868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00029: 1883869-1885868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 2.0kb downstream 2.0kb downstream 3832 true AmTr_v1.0_scaffold00029: 1880037-1883868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00029: 1880037-1882036 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 5.0kb upstream 5.0kb upstream 6832 true AmTr_v1.0_scaffold00029: 1882037-1888868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00029: 1883869-1888868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 5.0kb downstream 5.0kb downstream 6832 true AmTr_v1.0_scaffold00029: 1877037-1883868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00029: 1877037-1882036 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 10.0kb upstream 10.0kb upstream 11832 true AmTr_v1.0_scaffold00029: 1882037-1893868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00029: 1883869-1893868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 10.0kb downstream 10.0kb downstream 11832 true AmTr_v1.0_scaffold00029: 1872037-1883868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.154 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00029: 1872037-1882036 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049386 5273 Angiosperm View MSA
121311379 5274 Embryophyte View MSA
123348684 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain