Gene : evm_27.TU.AmTr_v1.0_scaffold00032.126 A. trichopoda v1.0
Defline:  (1 of 1) 2.6.1.11 - Acetylornithine transaminase / Succinylornithine aminotransferase Genomic Order:  126
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00032.126 Secondary Identifier:  ? PAC:31560149
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ARGSYNBSUB-PWY Amborella trichopoda pathologic  
Atrichopoda ARGSYN-PWY Amborella trichopoda pathologic  
Atrichopoda GLUTORN-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00032.126 0.5kb upstream 0.5kb upstream 5508 true AmTr_v1.0_scaffold00032: 2403652-2409159 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00032: 2408660-2409159 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 0.5kb downstream 0.5kb downstream 5508 true AmTr_v1.0_scaffold00032: 2403152-2408659 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00032: 2403152-2403651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 1.0kb upstream 1.0kb upstream 6008 true AmTr_v1.0_scaffold00032: 2403652-2409659 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00032: 2408660-2409659 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 1.0kb downstream 1.0kb downstream 6008 true AmTr_v1.0_scaffold00032: 2402652-2408659 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00032: 2402652-2403651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 2.0kb upstream 2.0kb upstream 7008 true AmTr_v1.0_scaffold00032: 2403652-2410659 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00032: 2408660-2410659 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 2.0kb downstream 2.0kb downstream 7008 true AmTr_v1.0_scaffold00032: 2401652-2408659 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00032: 2401652-2403651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 5.0kb upstream 5.0kb upstream 10008 true AmTr_v1.0_scaffold00032: 2403652-2413659 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00032: 2408660-2413659 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 5.0kb downstream 5.0kb downstream 10008 true AmTr_v1.0_scaffold00032: 2398652-2408659 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00032: 2398652-2403651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 10.0kb upstream 10.0kb upstream 15008 true AmTr_v1.0_scaffold00032: 2403652-2418659 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00032: 2408660-2418659 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 10.0kb downstream 10.0kb downstream 15008 true AmTr_v1.0_scaffold00032: 2393652-2408659 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.126 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00032: 2393652-2403651 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044767 5273 Angiosperm View MSA
121344135 5274 Embryophyte View MSA
123424486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain