Gene : evm_27.TU.AmTr_v1.0_scaffold00032.130 A. trichopoda v1.0
Defline:  (1 of 1) PTHR13060 - SGT1 PROTEIN HSGT1 SUPPRESSOR OF GCR2 Genomic Order:  130
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00032.130 Secondary Identifier:  ? PAC:31560042
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00032.130 0.5kb upstream 0.5kb upstream 7355 true AmTr_v1.0_scaffold00032: 2474396-2481750 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00032: 2481251-2481750 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 0.5kb downstream 0.5kb downstream 7355 true AmTr_v1.0_scaffold00032: 2473896-2481250 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00032: 2473896-2474395 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 1.0kb upstream 1.0kb upstream 7855 true AmTr_v1.0_scaffold00032: 2474396-2482250 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00032: 2481251-2482250 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 1.0kb downstream 1.0kb downstream 7855 true AmTr_v1.0_scaffold00032: 2473396-2481250 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00032: 2473396-2474395 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 2.0kb upstream 2.0kb upstream 8855 true AmTr_v1.0_scaffold00032: 2474396-2483250 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00032: 2481251-2483250 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 2.0kb downstream 2.0kb downstream 8855 true AmTr_v1.0_scaffold00032: 2472396-2481250 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00032: 2472396-2474395 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 5.0kb upstream 5.0kb upstream 11855 true AmTr_v1.0_scaffold00032: 2474396-2486250 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00032: 2481251-2486250 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 5.0kb downstream 5.0kb downstream 11855 true AmTr_v1.0_scaffold00032: 2469396-2481250 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00032: 2469396-2474395 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 10.0kb upstream 10.0kb upstream 16855 true AmTr_v1.0_scaffold00032: 2474396-2491250 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00032: 2481251-2491250 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 10.0kb downstream 10.0kb downstream 16855 true AmTr_v1.0_scaffold00032: 2464396-2481250 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.130 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00032: 2464396-2474395 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046439 5273 Angiosperm View MSA
121348661 5274 Embryophyte View MSA
123424797 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain