Gene : evm_27.TU.AmTr_v1.0_scaffold00032.243 A. trichopoda v1.0
Defline:  (1 of 1) 1.3.3.3 - Coproporphyrinogen oxidase / Coproporphyrinogenase Genomic Order:  242
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00032.243 Secondary Identifier:  ? PAC:31560184
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda CHLOROPHYLL-SYN Amborella trichopoda pathologic  
Atrichopoda HEME-BIOSYNTHESIS-II Amborella trichopoda pathologic  
Atrichopoda PWY-5918 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00032.243 0.5kb upstream 0.5kb upstream 13075 true AmTr_v1.0_scaffold00032: 4762718-4775792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00032: 4762718-4763217 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 0.5kb downstream 0.5kb downstream 13075 true AmTr_v1.0_scaffold00032: 4763218-4776292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00032: 4775793-4776292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 1.0kb upstream 1.0kb upstream 13575 true AmTr_v1.0_scaffold00032: 4762218-4775792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00032: 4762218-4763217 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 1.0kb downstream 1.0kb downstream 13575 true AmTr_v1.0_scaffold00032: 4763218-4776792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00032: 4775793-4776792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 2.0kb upstream 2.0kb upstream 14575 true AmTr_v1.0_scaffold00032: 4761218-4775792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00032: 4761218-4763217 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 2.0kb downstream 2.0kb downstream 14575 true AmTr_v1.0_scaffold00032: 4763218-4777792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00032: 4775793-4777792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 5.0kb upstream 5.0kb upstream 17575 true AmTr_v1.0_scaffold00032: 4758218-4775792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00032: 4758218-4763217 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 5.0kb downstream 5.0kb downstream 17575 true AmTr_v1.0_scaffold00032: 4763218-4780792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00032: 4775793-4780792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 10.0kb upstream 10.0kb upstream 22575 true AmTr_v1.0_scaffold00032: 4753218-4775792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00032: 4753218-4763217 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 10.0kb downstream 10.0kb downstream 22575 true AmTr_v1.0_scaffold00032: 4763218-4785792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.243 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00032: 4775793-4785792 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043250 5273 Angiosperm View MSA
121345223 5274 Embryophyte View MSA
123424727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain