Gene : evm_27.TU.AmTr_v1.0_scaffold00031.102 A. trichopoda v1.0
Defline:  (1 of 3) PF00533//PF03031 - BRCA1 C Terminus (BRCT) domain (BRCT) // NLI interacting factor-like phosphatase (NIF) Genomic Order:  101
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00031.102 Secondary Identifier:  ? PAC:31551854
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00031.102 0.5kb upstream 0.5kb upstream 1564 true AmTr_v1.0_scaffold00031: 4062829-4064392 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00031: 4063893-4064392 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 0.5kb downstream 0.5kb downstream 1564 true AmTr_v1.0_scaffold00031: 4062329-4063892 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00031: 4062329-4062828 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 1.0kb upstream 1.0kb upstream 2064 true AmTr_v1.0_scaffold00031: 4062829-4064892 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00031: 4063893-4064892 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 1.0kb downstream 1.0kb downstream 2064 true AmTr_v1.0_scaffold00031: 4061829-4063892 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00031: 4061829-4062828 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 2.0kb upstream 2.0kb upstream 3064 true AmTr_v1.0_scaffold00031: 4062829-4065892 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00031: 4063893-4065892 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 2.0kb downstream 2.0kb downstream 3064 true AmTr_v1.0_scaffold00031: 4060829-4063892 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00031: 4060829-4062828 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 5.0kb upstream 5.0kb upstream 6064 true AmTr_v1.0_scaffold00031: 4062829-4068892 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00031: 4063893-4068892 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 5.0kb downstream 5.0kb downstream 6064 true AmTr_v1.0_scaffold00031: 4057829-4063892 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00031: 4057829-4062828 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 10.0kb upstream 10.0kb upstream 11064 true AmTr_v1.0_scaffold00031: 4062829-4073892 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00031: 4063893-4073892 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 10.0kb downstream 10.0kb downstream 11064 true AmTr_v1.0_scaffold00031: 4052829-4063892 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.102 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00031: 4052829-4062828 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050770 5273 Angiosperm View MSA
123428917 5275 Viridiplantae View MSA
121350466 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain